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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20306301_20314627_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20306301 - 20314627

Intron Length:

8327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GTTTCTTTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

1.2

87.9

29.3

Major BPS

77.3

0.68

79.3

29.4

Major PPT

77.9

0.63

78.7

33.7

Minor 5ss

41.5

-0.9

2.9

58.8

45.7

Minor BPS

72.5

0.57

1.4

73.53

38.6

Associated Gene:

Gene:

AKAP6

Ensembl Gene ID:

ENSAPLG00000015214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039623

20033004 - 20314761

281758