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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20372550_20373727_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20372550 - 20373727

Intron Length:

1178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCCC

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGCTGTTTAATT

Flanking Amino Acid:

QDNIQKQFDQDHDISLESME

Intron Amino Acid Position:

1318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

63.3

41.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

89.8

0.9

0.7

84.2

30.9

Minor 5ss

32.1

-2

3.2

43.2

43.9

Minor BPS

62.1

0.46

1.8

75.88

41.7

Associated Gene:

Gene:

ARHGAP5

Ensembl Gene ID:

ENSAPLG00000015365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016014

20364795 - 20405362

40568