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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20383826_20392487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20383826 - 20392487

Intron Length:

8662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TATTACTTAAAT

Flanking Amino Acid:

KTHKGKEDKKQKKKAKAFNP

Intron Amino Acid Position:

1243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

76.9

0.67

66.3

40.4

Major PPT

81.4

0.71

0.9

77.2

37.1

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

73.6

0.82

1.6

88.19

35.8

Associated Gene:

Gene:

ARHGAP5

Ensembl Gene ID:

ENSAPLG00000015365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016014

20364795 - 20405362

40568