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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20427098_20436551_F

Intron Information:

Intron Rank:

126763

Intron Class:

major

Intron Phase:

Intron Coordinates:

20427098 - 20436551

Intron Length:

9454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTAATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CCTTTGTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.8

33.7

Major BPS

84.4

0.85

34.5

Major PPT

79.8

0.67

0.9

70.3

44.5

Minor 5ss

32.2

-2

41.4

39.1

Minor BPS

57.7

0.32

2.1

74.4

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023741

20409230 - 20441165

31936