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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2050130_2054947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2050130 - 2054947

Intron Length:

4818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGGCT

5'SS Class:

major

3'SS Sequence:

TGTTTTGCAGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGCTGTTGCACT

Flanking Amino Acid:

NQHTCIHRSEGMSCMNKDHG

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.5

40.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

62.9

0.29

1.2

65.4

40.2

Minor 5ss

30.9

-2.2

3.7

48.2

47.4

Minor BPS

44.5

-0.3

2.2

64.89

45.7

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030627

2043826 - 2060534

16709

ENSAPLT00000027922

2043826 - 2081423

37598