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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20517024_20522934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20517024 - 20522934

Intron Length:

5911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGCATC

5'SS Class:

major

3'SS Sequence:

TTTAATTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATT

Flanking Amino Acid:

AEMFRKVHVPVLGLVQNMSV

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

69.5

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.1

0.57

70.4

39.7

Minor 5ss

46.9

-0.3

2.9

71.1

38.9

Minor BPS

0.96

86.64

33.8

Associated Gene:

Gene:

NUBPL

Ensembl Gene ID:

ENSAPLG00000015416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035441

20500503 - 20585065

84563

ENSAPLT00000029456

20500503 - 20588023

87521

ENSAPLT00000016082

20499964 - 20589023

89060

ENSAPLT00000046627

20500503 - 20528291

27789