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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20523021_20536754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20523021 - 20536754

Intron Length:

13734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

TAAACTTCAATG

Flanking Amino Acid:

LSISQNIPVAGAVIISTPQD

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

69.8

0.49

70.3

31.8

Major PPT

90.1

0.9

0.6

84.1

30.8

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

50.7

-0.1

1.6

54.66

40.5

Associated Gene:

Gene:

NUBPL

Ensembl Gene ID:

ENSAPLG00000015416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035441

20500503 - 20585065

84563

ENSAPLT00000029456

20500503 - 20588023

87521

ENSAPLT00000016082

20499964 - 20589023

89060