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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20536849_20557683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20536849 - 20557683

Intron Length:

20835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTCCAAAATA

Flanking Amino Acid:

MSAVEKLLRQVDWGQLDYLV

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.5

0.84

0.6

81.2

30.9

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

0.06

1.9

66.5

40.3

Associated Gene:

Gene:

NUBPL

Ensembl Gene ID:

ENSAPLG00000015416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035441

20500503 - 20585065

84563

ENSAPLT00000029456

20500503 - 20588023

87521

ENSAPLT00000016082

20499964 - 20589023

89060