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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2055591_2056480_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2055591 - 2056480

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTCAGTACA

5'SS Class:

major

3'SS Sequence:

ATGCTCCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTGCTCATTT

Flanking Amino Acid:

IMHMDGKTCLEREEAAVEIP

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

71.6

40.2

Major BPS

100

1.24

0.5

100

Major PPT

76.8

0.6

0.9

69.4

36.3

Minor 5ss

-2.2

2.4

27.5

35.4

Minor BPS

52.3

0.15

2.2

79.99

42.5

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030627

2043826 - 2060534

16709

ENSAPLT00000002752

2044133 - 2081423

37291