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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2055591_2056960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2055591 - 2056960

Intron Length:

1370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTCAGTACA

5'SS Class:

major

3'SS Sequence:

TATTGTTGGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ACTTTATTTATT

Flanking Amino Acid:

IMHMDGKTCLETCAVNNGGC

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

71.6

40.2

Major BPS

88.7

0.96

0.8

36.5

Major PPT

63.4

0.3

1.1

58.4

Minor 5ss

-2.2

2.4

27.5

35.4

Minor BPS

50.3

0.09

1.9

70.57

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027922

2043826 - 2081423

37598