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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20557775_20557861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20557775 - 20557861

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCATG

5'SS Class:

major

3'SS Sequence:

TGTGTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTTAT

U12 Branch Point Sequence:

CTAACCTTATGC

Flanking Amino Acid:

MRPLKNYGIACMSMGFLIDE

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.5

41.3

Major BPS

0.5

59.6

38.6

Major PPT

0.67

76.9

42.1

Minor 5ss

37.7

-1.4

45.6

43.8

Minor BPS

-0.1

59.75

45.1

Associated Gene:

Gene:

NUBPL

Ensembl Gene ID:

ENSAPLG00000015416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016082

20499964 - 20589023

89060

ENSAPLT00000035441

20500503 - 20585065

84563

ENSAPLT00000029456

20500503 - 20588023

87521