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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20557902_20571525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20557902 - 20571525

Intron Length:

13624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

CCTTCCAAAAAA

Flanking Amino Acid:

NLKGNPELTPKNLMRPLKNY

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

62.7

0.32

1.2

33.2

Major PPT

78.7

0.65

0.9

76.9

37.3

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

47.8

-0.1

2.1

61.2

44.7

Associated Gene:

Gene:

NUBPL

Ensembl Gene ID:

ENSAPLG00000015416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035441

20500503 - 20585065

84563

ENSAPLT00000029456

20500503 - 20588023

87521

ENSAPLT00000016082

20499964 - 20589023

89060