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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2057078_2058091_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2057078 - 2058091

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AGTTTTTAAAAT

Flanking Amino Acid:

TLQFDGKTCKDIDECQSNNG

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.2

0.82

0.8

80.4

36.6

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

53.9

0.2

1.7

71.69

39.3

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027922

2043826 - 2081423

37598

ENSAPLT00000002752

2044133 - 2081423

37291