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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20571617_20582190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20571617 - 20582190

Intron Length:

10574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTGAA

5'SS Class:

major

3'SS Sequence:

GGTCCTTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TGGTCCTTACAC

Flanking Amino Acid:

IALALAANDSKKEVGLLDAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

68.9

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

67.4

0.39

39.3

Minor 5ss

31.1

-2.2

3.4

39.8

46.2

Minor BPS

0.29

1.8

68.44

42.8

Associated Gene:

Gene:

NUBPL

Ensembl Gene ID:

ENSAPLG00000015416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035441

20500503 - 20585065

84563

ENSAPLT00000016082

20499964 - 20589023

89060