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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2058215_2059654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2058215 - 2059654

Intron Length:

1440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTAAAACTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

ATCCCTTTAAAA

Flanking Amino Acid:

KLLTDEKSCQDIDECSFERT

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

71.3

0.48

63.3

42.5

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

63.8

0.43

1.4

68.5

37.6

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027922

2043826 - 2081423

37598

ENSAPLT00000002752

2044133 - 2081423

37291