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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20582226_20585029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20582226 - 20585029

Intron Length:

2804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGATT

5'SS Class:

major

3'SS Sequence:

CTTTTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTTTCCTTCTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

75.8

39.8

Major BPS

78.2

0.7

77.9

32.1

Major PPT

92.6

0.96

0.6

88.3

21.3

Minor 5ss

36.2

-1.6

3.7

56.4

Minor BPS

48.4

-0

3.6

87.57

38.6

Associated Gene:

Gene:

NUBPL

Ensembl Gene ID:

ENSAPLG00000015416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035441

20500503 - 20585065

84563