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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2064149_2065375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2064149 - 2065375

Intron Length:

1227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCATACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTCCTTTAATT

Flanking Amino Acid:

FQEGLEQMIPERHNSLTERL

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

82.5

29.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

82.4

0.73

0.9

77.3

36.1

Minor 5ss

43.1

-0.8

2.9

57.4

46.9

Minor BPS

76.1

0.9

1.2

84.98

35.9

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002752

2044133 - 2081423

37291