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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20674975_20678536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20674975 - 20678536

Intron Length:

3562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

GCTTTTGTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAT

U12 Branch Point Sequence:

GTTGCATCCATT

Flanking Amino Acid:

DDSPSYLPTKLAAVVCLGYL

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

72.4

0.56

1.2

39.9

Major PPT

78.7

0.65

0.9

76.9

37.3

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

43.9

-0.4

2.2

66.06

44.6

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044731

20662663 - 20724422

61760

ENSAPLT00000035041

20662663 - 20724947

62285