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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20675416_20678536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20675416 - 20678536

Intron Length:

3121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTGTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAT

U12 Branch Point Sequence:

GTTGCATCCATT

Flanking Amino Acid:

MNKLSAAVVCLGYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

84.4

33.5

Major BPS

72.4

0.56

1.2

39.9

Major PPT

78.7

0.65

0.9

76.9

37.3

Minor 5ss

33.8

-1.8

2.6

44.2

Minor BPS

43.9

-0.4

2.2

66.06

44.6

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003210

20675402 - 20724422

49021