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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20686824_20689672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20686824 - 20689672

Intron Length:

2849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTCTCTTTAATT

Flanking Amino Acid:

PLGIPHGKGKVIMTVAEELL

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

74.8

35.8

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

74.9

0.56

1.1

75.6

38.1

Minor 5ss

45.5

-0.5

3.1

65.3

46.1

Minor BPS

83.8

1.14

91.31

32.6

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035041

20662663 - 20724947

62285

ENSAPLT00000003210

20675402 - 20724422

49021

ENSAPLT00000044731

20662663 - 20724422

61760