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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20689785_20690697_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20689785 - 20690697

Intron Length:

913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATGGC

5'SS Class:

strong_major

3'SS Sequence:

TCAATACCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

CTGTCAATACCT

Flanking Amino Acid:

WLLIAALMTLGPAVVQHHLP

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

36.9

Major BPS

77.7

0.69

83.3

27.7

Major PPT

70.4

0.46

0.9

62.4

38.6

Minor 5ss

32.4

-2

3.3

43.9

Minor BPS

47.3

-0.1

2.2

69.87

46.6

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044731

20662663 - 20724422

61760

ENSAPLT00000035041

20662663 - 20724947

62285

ENSAPLT00000003210

20675402 - 20724422

49021