Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_20697535_20698994_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20697535 - 20698994

Intron Length:

1460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAG

5'SS Class:

major

3'SS Sequence:

CATTTTGCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTCTCATTT

Flanking Amino Acid:

VIFSHIAETHRLQVLEQLLN

Intron Amino Acid Position:

695

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

38.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

68.5

0.42

1.1

71.9

Minor 5ss

35.4

-1.7

3.3

45.9

49.3

Minor BPS

62.3

0.47

1.8

83.64

37.8

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035041

20662663 - 20724947

62285

ENSAPLT00000003210

20675402 - 20724422

49021

ENSAPLT00000044731

20662663 - 20724422

61760