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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20702809_20705686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20702809 - 20705686

Intron Length:

2878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TGTTTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTGTCTTGACT

Flanking Amino Acid:

NLSSLVSCLCEILLDNSVLV

Intron Amino Acid Position:

1076

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

76.1

34.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

84.3

0.77

0.9

80.6

Minor 5ss

35.9

-1.6

2.9

43.1

43.9

Minor BPS

0.93

1.3

90.53

33.5

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044731

20662663 - 20724422

61760