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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20702809_20707634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20702809 - 20707634

Intron Length:

4826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TCGCACGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

ACCATCTTACTG

Flanking Amino Acid:

NLSSLVSCLCVNLCSSYLLL

Intron Amino Acid Position:

968

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

76.1

34.8

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

69.8

0.45

65.2

40.8

Minor 5ss

35.9

-1.6

2.9

43.1

43.9

Minor BPS

46.7

-0.3

1.7

45.13

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003210

20675402 - 20724422

49021

ENSAPLT00000035041

20662663 - 20724947

62285