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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20705714_20707634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20705714 - 20707634

Intron Length:

1921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTCCC

5'SS Class:

major

3'SS Sequence:

TCGCACGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

ACCATCTTACTG

Flanking Amino Acid:

CEILLDNSVLVNLCSSYLLL

Intron Amino Acid Position:

1085

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

62.9

39.7

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

69.8

0.45

65.2

40.8

Minor 5ss

34.2

-1.8

3.1

38.9

Minor BPS

46.7

-0.3

1.7

45.13

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044731

20662663 - 20724422

61760