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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20709047_20709794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20709047 - 20709794

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCCTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

TGTGTCCTAACA

Flanking Amino Acid:

LCKDVLAASADFNTVASIDT

Intron Amino Acid Position:

1074

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

86.2

29.2

Major BPS

0.1

59.7

32.6

Major PPT

72.1

0.5

66.5

39.6

Minor 5ss

38.5

-1.3

2.8

49.8

40.3

Minor BPS

59.5

0.29

1.8

72.44

39.4

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044731

20662663 - 20724422

61760

ENSAPLT00000035041

20662663 - 20724947

62285

ENSAPLT00000003210

20675402 - 20724422

49021