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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20710936_20712580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20710936 - 20712580

Intron Length:

1645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGCACC

5'SS Class:

major

3'SS Sequence:

AACTCTTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TGTTGTATAACT

Flanking Amino Acid:

HVILEQYQANVGAALRPAFA

Intron Amino Acid Position:

1215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

71.8

38.2

Major BPS

78.2

0.7

77.9

32.1

Major PPT

73.2

0.52

0.8

70.5

35.3

Minor 5ss

43.1

-0.8

2.8

58.2

39.2

Minor BPS

58.2

0.34

81.57

39.9

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044731

20662663 - 20724422

61760

ENSAPLT00000035041

20662663 - 20724947

62285

ENSAPLT00000003210

20675402 - 20724422

49021