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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20712650_20713077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20712650 - 20713077

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTACAACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTGTCTCTAACT

Flanking Amino Acid:

PPDVTAKACQVCSAWIASGV

Intron Amino Acid Position:

1238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.7

1.17

0.7

98.4

4.81

Major BPS

73.5

0.59

81.3

29.9

Major PPT

70.1

0.45

0.9

60.8

40.3

Minor 5ss

28.3

-2.5

4.2

48.7

47.5

Minor BPS

72.3

0.78

1.6

88.53

36.5

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035041

20662663 - 20724947

62285

ENSAPLT00000003210

20675402 - 20724422

49021

ENSAPLT00000044731

20662663 - 20724422

61760