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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20714741_20715180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20714741 - 20715180

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

TATCCTTGAAAC

Flanking Amino Acid:

SEYASQLPAEGGTFYTAETI

Intron Amino Acid Position:

1376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

70.4

0.51

67.1

39.4

Major PPT

87.5

0.84

0.6

84.2

23.8

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

57.7

0.22

1.5

67.77

36.8

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035041

20662663 - 20724947

62285

ENSAPLT00000003210

20675402 - 20724422

49021

ENSAPLT00000044731

20662663 - 20724422

61760