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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20718257_20718938_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20718257 - 20718938

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAA

5'SS Class:

major

3'SS Sequence:

CTTTTTGTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGGAT

U12 Branch Point Sequence:

TCTGCTATATTT

Flanking Amino Acid:

HVKEKRRSAEVDDGAAEKET

Intron Amino Acid Position:

1551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

65.4

36.8

Major BPS

56.3

0.16

1.5

57.1

49.4

Major PPT

84.3

0.77

0.8

80.6

31.4

Minor 5ss

34.3

-1.8

3.5

46.3

Minor BPS

47.8

-0

1.9

67.91

43.9

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035041

20662663 - 20724947

62285

ENSAPLT00000003210

20675402 - 20724422

49021

ENSAPLT00000044731

20662663 - 20724422

61760