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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20722087_20723627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20722087 - 20723627

Intron Length:

1541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

ATTTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

CAGTTTGTAACT

Flanking Amino Acid:

KITLDSKDPFVQCKCYQLLH

Intron Amino Acid Position:

1769

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

0.85

0.9

39.9

Major PPT

88.5

0.87

0.7

85.9

27.9

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

50.3

0.09

67.7

43.8

Associated Gene:

Gene:

HEATR5A

Ensembl Gene ID:

ENSAPLG00000003094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044731

20662663 - 20724422

61760

ENSAPLT00000035041

20662663 - 20724947

62285

ENSAPLT00000003210

20675402 - 20724422

49021