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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2072256_2074145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2072256 - 2074145

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCACAGAAA

5'SS Class:

major

3'SS Sequence:

TCCTCTAGATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

TACACTTTGAAG

Flanking Amino Acid:

AHSVSQCGGKCSPGEYSPDG

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

62.4

41.9

Major BPS

74.8

0.62

39.8

Major PPT

66.9

0.38

66.7

38.1

Minor 5ss

19.5

-3.5

3.9

43.2

Minor BPS

49.8

-0.1

1.6

53.04

41.8

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027922

2043826 - 2081423

37598