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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2074309_2076377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2074309 - 2076377

Intron Length:

2069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

AAATACCCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

ASLFQDCETKVQCSPGHFYN

Intron Amino Acid Position:

720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

64.4

0.32

52.6

42.5

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027922

2043826 - 2081423

37598

ENSAPLT00000002752

2044133 - 2081423

37291