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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20766243_20767141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20766243 - 20767141

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CATTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATAATTAAAT

Flanking Amino Acid:

SRDLAEQCVKVLELICTRES

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.1

0.72

0.9

76.6

37.2

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

59.6

0.38

1.9

81.16

39.3

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195

ENSAPLT00000038197

20749688 - 20808882

59195