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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20767370_20769610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20767370 - 20769610

Intron Length:

2241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CATCTTTTCACT

Flanking Amino Acid:

SSLLKHEDHQVSDGALRCFA

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

81.8

0.72

0.7

77.3

30.7

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

52.4

0.16

1.8

69.58

41.7

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195