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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20769893_20770153_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20769893 - 20770153

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TAATTATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTATTT

Flanking Amino Acid:

LCRGSPVVTHDLLRSELPDS

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

82.8

29.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.4

0.66

0.9

70.5

44.2

Minor 5ss

37.6

-1.4

3.1

54.1

Minor BPS

56.4

0.28

82.33

38.9

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195