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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20770425_20770764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20770425 - 20770764

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTATCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTAATT

Flanking Amino Acid:

DALIDAIDTGAFEVNFMDDV

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.1

0.77

0.8

81.5

35.9

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

78.7

0.98

1.3

92.74

29.1

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002489

20749688 - 20808882

59195

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195