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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20771478_20772061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20771478 - 20772061

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTTTGTTTGAAT

Flanking Amino Acid:

SEVVAILQSPGDWMCPVNKG

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

74.6

0.61

1.4

34.5

Major PPT

87.7

0.85

0.7

81.2

36.5

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

61.5

0.44

1.9

83.91

37.2

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195