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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20773748_20773958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20773748 - 20773958

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CATTTTATGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CATTTTATGACA

Flanking Amino Acid:

EITATVLDQEDDDDGHLLAL

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

73.3

0.52

69.3

40.3

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

52.1

0.06

1.6

63.17

37.1

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195