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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20775288_20775375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20775288 - 20775375

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTATTT

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

GTTTATATAATT

Flanking Amino Acid:

GSPEGGSDSSGIGLLNSKGC

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

74.4

36.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

42.6

-0.8

3.4

64.9

46.4

Minor BPS

58.1

0.33

1.8

78.75

37.3

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195