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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20775288_20778387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20775288 - 20778387

Intron Length:

3100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTATTT

5'SS Class:

major

3'SS Sequence:

TGTTTTTAAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTGTTTTTAAAT

Flanking Amino Acid:

GSPEGGSDSSESRSEFLEKL

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

74.4

36.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

72.8

0.51

70.7

39.1

Minor 5ss

42.6

-0.8

3.4

64.9

46.4

Minor BPS

72.8

0.79

1.3

84.4

36.4

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002489

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195