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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20778652_20778782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20778652 - 20778782

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

AAATACATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

ACTTCTCTAAAA

Flanking Amino Acid:

KHSFTAETSLGSEFVTGWTG

Intron Amino Acid Position:

807

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

81.8

38.5

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

65.1

0.34

56.4

43.1

Minor 5ss

38.9

-1.2

2.8

43.3

43.8

Minor BPS

56.3

0.19

1.8

67.69

38.5

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195