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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20778860_20780079_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20778860 - 20780079

Intron Length:

1220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGAG

5'SS Class:

major

3'SS Sequence:

AATCCTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

TGATTATGAAAA

Flanking Amino Acid:

KSKLEKTKQKVRTMARDLYD

Intron Amino Acid Position:

833

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.2

64.4

41.8

Major BPS

75.5

0.63

40.9

Major PPT

75.7

0.58

0.8

70.1

35.4

Minor 5ss

-2.6

3.1

31.3

Minor BPS

48.1

-0.1

1.8

60.74

38.1

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195