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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2077932_2078584_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2077932 - 2078584

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTGAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAG

U12 Branch Point Sequence:

TTTTCTTTGAAA

Flanking Amino Acid:

CGDYLVMRKSSSSNSVTTYE

Intron Amino Acid Position:

840

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

74.8

35.3

Major BPS

60.9

0.27

1.7

71.4

45.1

Major PPT

74.3

0.55

1.1

78.4

33.9

Minor 5ss

39.2

-1.2

3.4

45.5

Minor BPS

75.2

0.79

1.3

83.42

30.1

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027922

2043826 - 2081423

37598

ENSAPLT00000002752

2044133 - 2081423

37291