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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20781043_20781230_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20781043 - 20781230

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCACTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TGTGTGGTAACA

Flanking Amino Acid:

TAFSENEDDESRPAVALIRK

Intron Amino Acid Position:

958

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

84.1

30.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

85.3

0.79

0.8

80.2

31.6

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

44.2

-0.4

2.6

62.92

43.8

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002489

20749688 - 20808882

59195

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195