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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20782045_20782123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20782045 - 20782123

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCAAC

5'SS Class:

major

3'SS Sequence:

CATTCATGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTTTCTTCATT

Flanking Amino Acid:

ESLEQYLLKMVAKQWYDFDR

Intron Amino Acid Position:

1039

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

0.9

70.2

35.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

67.9

0.4

62.5

38.4

Minor 5ss

34.4

-1.8

2.9

39.8

40.4

Minor BPS

73.4

0.82

1.7

91.07

32.9

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195

ENSAPLT00000038197

20749688 - 20808882

59195