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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20783659_20783847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20783659 - 20783847

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

AAATTTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTGAATTTAAAT

Flanking Amino Acid:

TVNGVCEDQLGKAAKEAEAN

Intron Amino Acid Position:

1249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

72.9

0.52

0.9

67.1

39.2

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

57.9

0.33

1.7

75.07

41.3

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195

ENSAPLT00000038197

20749688 - 20808882

59195