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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2078738_2080405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2078738 - 2080405

Intron Length:

1668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GCATTCTCAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

GCATTCTCAATA

Flanking Amino Acid:

GFQVPYVTYDEDYQELIEDI

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

58.9

0.22

49.8

35.1

Major PPT

63.7

0.31

0.9

36.9

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

56.1

0.19

1.5

60.76

39.5

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027922

2043826 - 2081423

37598

ENSAPLT00000002752

2044133 - 2081423

37291