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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20790905_20792609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20790905 - 20792609

Intron Length:

1705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ATATGTATTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AAATATATAAAT

Flanking Amino Acid:

TGQEAEYSLYDFLDSCRAST

Intron Amino Acid Position:

1661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

27.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

69.8

0.44

42.3

Minor 5ss

44.9

-0.5

2.8

58.5

40.5

Minor BPS

47.2

-0.1

1.8

64.37

38.9

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195