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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20795048_20795888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20795048 - 20795888

Intron Length:

841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTGCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTTGTATTAACA

Flanking Amino Acid:

QTTDLEIPPPGTPHSELLEE

Intron Amino Acid Position:

1758

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.8

41.1

Major BPS

81.9

0.79

0.8

81.9

Major PPT

80.4

0.68

0.9

76.9

31.7

Minor 5ss

51.1

0.04

2.4

67.9

43.4

Minor BPS

67.7

0.55

1.7

80.01

35.9

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195